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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17210376_17212153_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17210376 - 17212153

Intron Length:

1778

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAGGACAC

5'SS Class:

major

3'SS Sequence:

GTTTCCTCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTCAG

U12 Branch Point Sequence:

GTTTCCTCAACA

Flanking Amino Acid:

PGLPGKRGQRGEKGRAGDPG

Intron Amino Acid Position:

235

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.48

1.1

56.9

42.6

Major BPS

46.3

-0.2

1.6

52.7

43.2

Major PPT

75.3

0.57

0.9

70.4

35.1

Minor 5ss

30.4

-2.2

3.3

33.5

Minor BPS

0.88

1.4

85.01

34.2

Associated Gene:

Gene:

COL13A1

Ensembl Gene ID:

ENSAPLG00000012044

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038255

17190733 - 17219365

28633

ENSAPLT00000012619

17190733 - 17219365

28633