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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17212208_17212762_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17212208 - 17212762

Intron Length:

555

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGTATT

5'SS Class:

major

3'SS Sequence:

TCCTTGCACGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTGCAC

U12 Branch Point Sequence:

TTTCCTTGCACG

Flanking Amino Acid:

PGLPGLPGLKGEKGNSENAL

Intron Amino Acid Position:

253

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.7

1.1

84.7

32.4

Major BPS

52.8

0.07

1.4

66.7

39.9

Major PPT

70.4

0.46

0.9

65.3

35.2

Minor 5ss

44.1

-0.6

2.5

60.5

43.9

Minor BPS

50.8

-0.1

65.65

42.1

Associated Gene:

Gene:

COL13A1

Ensembl Gene ID:

ENSAPLG00000012044

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038255

17190733 - 17219365

28633

ENSAPLT00000012619

17190733 - 17219365

28633