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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17212850_17213093_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17212850 - 17213093

Intron Length:

244

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

CTTTCCCTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCAGAA

U12 Branch Point Sequence:

CCATGCAGAACG

Flanking Amino Acid:

PGLPGPPGPKGEAGDVGAAG

Intron Amino Acid Position:

282

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.7

1.01

0.7

84.8

25.1

Major BPS

49.9

-0

1.1

46.7

38.9

Major PPT

83.2

0.75

0.7

80.9

24.2

Minor 5ss

31.8

-2.1

3.3

42.9

44.7

Minor BPS

42.4

-0.7

2.1

45.86

46.1

Associated Gene:

Gene:

COL13A1

Ensembl Gene ID:

ENSAPLG00000012044

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038255

17190733 - 17219365

28633

ENSAPLT00000012619

17190733 - 17219365

28633