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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17213870_17214460_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17213870 - 17214460

Intron Length:

591

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAGGTGTC

5'SS Class:

major

3'SS Sequence:

TGGTATTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTAAA

U12 Branch Point Sequence:

AATCCCTAAACC

Flanking Amino Acid:

PGEQGPMGPRGPKGEPGKDE

Intron Amino Acid Position:

312

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

1.1

72.7

38.4

Major BPS

59.8

0.24

1.2

61.9

33.9

Major PPT

79.3

0.66

0.9

73.2

41.7

Minor 5ss

35.4

-1.7

3.5

43.2

44.5

Minor BPS

64.4

0.43

1.7

71.89

38.7

Associated Gene:

Gene:

COL13A1

Ensembl Gene ID:

ENSAPLG00000012044

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038255

17190733 - 17219365

28633

ENSAPLT00000012619

17190733 - 17219365

28633