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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17215983_17216484_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17215983 - 17216484

Intron Length:

502

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTTGCT

5'SS Class:

major

3'SS Sequence:

TCTTGTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAACAAT

U12 Branch Point Sequence:

TGCTTCCAAACT

Flanking Amino Acid:

AGPPGPPGQKGEIGLPGPPG

Intron Amino Acid Position:

361

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

73.4

35.4

Major BPS

57.4

0.18

1.3

65.4

Major PPT

82.9

0.74

0.9

80.2

37.3

Minor 5ss

41.5

-0.9

3.1

59.5

Minor BPS

50.5

0.09

72.75

44.1

Associated Gene:

Gene:

COL13A1

Ensembl Gene ID:

ENSAPLG00000012044

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038255

17190733 - 17219365

28633

ENSAPLT00000012619

17190733 - 17219365

28633