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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17217644_17218072_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17217644 - 17218072

Intron Length:

429

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGAGTG

5'SS Class:

major

3'SS Sequence:

CTGTTGTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAC

U12 Branch Point Sequence:

GCCGTTGTGACA

Flanking Amino Acid:

PGPIGLPGLTGEKGEPGERG

Intron Amino Acid Position:

460

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.1

63.9

40.8

Major BPS

71.3

0.53

1.2

63.1

44.5

Major PPT

73.8

0.54

68.6

Minor 5ss

36.2

-1.6

3.5

44.8

Minor BPS

41.6

-0.6

45.01

38.8

Associated Gene:

Gene:

COL13A1

Ensembl Gene ID:

ENSAPLG00000012044

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038255

17190733 - 17219365

28633

ENSAPLT00000012619

17190733 - 17219365

28633