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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17218127_17218928_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17218127 - 17218928

Intron Length:

802

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAGGTCAC

5'SS Class:

major

3'SS Sequence:

TGTTGCTTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGACAG

U12 Branch Point Sequence:

TTGACAGGGACT

Flanking Amino Acid:

RGDKGNPGESMSGPPGPQGP

Intron Amino Acid Position:

478

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

1.1

63.6

42.9

Major BPS

47.5

-0.1

1.6

60.7

45.9

Major PPT

78.3

0.64

0.9

41.4

Minor 5ss

33.6

-1.9

3.2

44.4

43.5

Minor BPS

42.4

-0.5

2.3

65.94

44.4

Associated Gene:

Gene:

COL13A1

Ensembl Gene ID:

ENSAPLG00000012044

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038255

17190733 - 17219365

28633

ENSAPLT00000012619

17190733 - 17219365

28633