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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17227641_17277338_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17227641 - 17277338

Intron Length:

49698

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAACGGC

5'SS Class:

major

3'SS Sequence:

GTGCTGCTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTCAT

U12 Branch Point Sequence:

AGCTCATGGAGT

Flanking Amino Acid:

SMGKNDGVGQVNGRSCLQKA

Intron Amino Acid Position:

389

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

59.9

39.6

Major BPS

70.9

0.52

1.1

71.4

36.6

Major PPT

63.1

0.3

1.1

57.8

43.2

Minor 5ss

30.6

-2.2

3.4

41.1

45.6

Minor BPS

44.4

-0.3

60.19

Associated Gene:

Gene:

AIFM2

Ensembl Gene ID:

ENSAPLG00000029564

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020673

17224890 - 17282051

57162