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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17257808_17265486_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17257808 - 17265486

Intron Length:

7679

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAACCAA

5'SS Class:

major

3'SS Sequence:

ATGTGTTTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTATCTCAATG

Flanking Amino Acid:

YMAAVIEYLAAEILELAGNA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

67.5

39.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

79.6

0.67

0.9

73.4

41.3

Minor 5ss

36.5

-1.5

3.1

48.3

Minor BPS

61.1

0.21

1.6

68.04

39.8

Associated Gene:

Gene:

MACROH2A2

Ensembl Gene ID:

ENSAPLG00000011576

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012121

17257575 - 17276002

18428