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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17270433_17271377_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17270433 - 17271377

Intron Length:

945

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGGCCC

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTCAA

U12 Branch Point Sequence:

GTAGCTCAAAGC

Flanking Amino Acid:

TAEIDLKEEIGKALEKAGGK

Intron Amino Acid Position:

230

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

0.9

66.5

39.1

Major BPS

61.8

0.29

1.1

63.4

35.6

Major PPT

0.83

0.7

81.4

30.6

Minor 5ss

26.6

-2.7

3.1

33.5

41.9

Minor BPS

39.6

-0.8

2.1

48.03

41.8

Associated Gene:

Gene:

MACROH2A2

Ensembl Gene ID:

ENSAPLG00000011576

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012121

17257575 - 17276002

18428