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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17271468_17273439_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17271468 - 17273439

Intron Length:

1972

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAAGG

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTTGATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAA

U12 Branch Point Sequence:

TTTCCTTTGATA

Flanking Amino Acid:

KSQGPLEVAEAALTQSSGLA

Intron Amino Acid Position:

260

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

68.8

42.1

Major BPS

78.4

0.71

0.9

81.3

29.8

Major PPT

78.1

0.63

0.9

76.3

32.4

Minor 5ss

32.2

-2

40.4

45.3

Minor BPS

73.2

0.72

1.1

79.54

29.6

Associated Gene:

Gene:

MACROH2A2

Ensembl Gene ID:

ENSAPLG00000011576

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012121

17257575 - 17276002

18428