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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17277389_17278317_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17277389 - 17278317

Intron Length:

929

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGTCG

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTGAA

U12 Branch Point Sequence:

CTTCATTTAAGC

Flanking Amino Acid:

THKPLKTYQPGSLTFLLSMG

Intron Amino Acid Position:

372

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.1

38.1

Major BPS

74.8

0.62

39.8

Major PPT

90.4

0.91

0.6

83.6

31.4

Minor 5ss

31.6

-2.1

3.2

38.5

46.7

Minor BPS

51.8

0.04

1.8

64.35

41.4

Associated Gene:

Gene:

AIFM2

Ensembl Gene ID:

ENSAPLG00000029564

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020673

17224890 - 17282051

57162