Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_17279337_17279424_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17279337 - 17279424

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGGGCT

5'SS Class:

strong_major

3'SS Sequence:

TCCGTCCCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAC

U12 Branch Point Sequence:

TCCGTCCCAACA

Flanking Amino Acid:

LLRKGVRLLLGERVSNVENL

Intron Amino Acid Position:

254

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

72.2

37.3

Major BPS

71.3

0.53

1.2

63.1

44.5

Major PPT

67.8

0.4

0.9

62.1

33.5

Minor 5ss

37.9

-1.4

3.6

56.2

48.2

Minor BPS

45.3

-0.3

1.9

55.29

43.9

Associated Gene:

Gene:

AIFM2

Ensembl Gene ID:

ENSAPLG00000029564

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020673

17224890 - 17282051

57162