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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17312671_17313199_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17312671 - 17313199

Intron Length:

529

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

CCACTTCCTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGATAAT

U12 Branch Point Sequence:

CTTTTCCCACTT

Flanking Amino Acid:

DRLGPGMADLCKTYISEYSD

Intron Amino Acid Position:

326

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.8

80.2

28.3

Major BPS

72.6

0.56

1.2

72.3

40.4

Major PPT

75.4

0.57

0.8

69.1

31.2

Minor 5ss

40.6

-1

2.8

49.4

41.4

Minor BPS

45.6

-0.2

2.1

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028226

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039185

17281534 - 17317204

35671