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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17316155_17317108_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17316155 - 17317108

Intron Length:

954

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGTAA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTGTACTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

TTTCGTATAAAT

Flanking Amino Acid:

VHEVKMETVEKASVQEKTFS

Intron Amino Acid Position:

364

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

28.7

Major BPS

74.5

0.61

79.6

29.1

Major PPT

75.4

0.57

73.6

40.9

Minor 5ss

-1.6

3.3

46.2

49.1

Minor BPS

48.8

-0

2.1

75.73

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028226

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039185

17281534 - 17317204

35671

ENSAPLT00000017757

17281534 - 17317216

35683