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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17317607_17317766_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17317607 - 17317766

Intron Length:

160

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGGTAAT

5'SS Class:

major

3'SS Sequence:

TTCGTCTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

AAAGTGTTGATG

Flanking Amino Acid:

CAANKPPQQPAVVKPEGGFC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

1.2

79.1

36.4

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

86.5

0.82

0.7

84.4

30.6

Minor 5ss

32.4

-2

2.9

42.3

44.5

Minor BPS

41.6

-0.8

40.96

37.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021054

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039987

17317438 - 17328749

11312