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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17319349_17328128_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

17319349 - 17328128

Intron Length:

8780

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTTTGCACT

5'SS Class:

weak_major

3'SS Sequence:

GTCGGACCCGAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

TCAGCCCTGACC

Flanking Amino Acid:

LLAEMMDPTFVVCGTIKLCQ

Intron Amino Acid Position:

128

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.03

1.2

54.8

41.7

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

49.3

-0

1.1

45.6

35.9

Minor 5ss

-0.3

2.5

66.2

38.6

Minor BPS

52.3

0.05

1.8

63.23

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021054

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039987

17317438 - 17328749

11312