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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17329196_17329291_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

17329196 - 17329291

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCGAGCTGG

5'SS Class:

strong_major

3'SS Sequence:

CCCCCCCAAACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

CTGCTCTCACCC

Flanking Amino Acid:

ESLLENNMTEEQLVNDIEKV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

58.6

46.1

Major BPS

72.7

0.56

30.1

Major PPT

59.7

0.22

0.9

28.3

Minor 5ss

27.5

-2.6

3.9

37.8

47.1

Minor BPS

46.5

-0.2

1.8

55.21

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022662

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039871

17329076 - 17334374

5299