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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17353456_17354148_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17353456 - 17354148

Intron Length:

693

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGAT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCCTCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCACAC

U12 Branch Point Sequence:

TTCTCCTCCACA

Flanking Amino Acid:

HGFVELQIQRGRGELQNCTF

Intron Amino Acid Position:

236

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.8

78.2

31.2

Major BPS

55.5

0.14

64.3

32.4

Major PPT

81.3

0.71

0.7

76.1

Minor 5ss

25.4

-2.8

3.5

36.8

47.7

Minor BPS

60.7

0.33

75.44

42.2

Associated Gene:

Gene:

VSIR

Ensembl Gene ID:

ENSAPLG00000022193

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044542

17352750 - 17355222

2473

ENSAPLT00000020711

17352750 - 17356463

3714