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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17354197_17354584_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17354197 - 17354584

Intron Length:

388

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGAAA

5'SS Class:

strong_major

3'SS Sequence:

TCGTATCTTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTAAAAT

U12 Branch Point Sequence:

CGTATCTTACAG

Flanking Amino Acid:

NCTFYTANSKDITAAALATG

Intron Amino Acid Position:

252

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

77.3

32.6

Major BPS

58.2

0.21

1.2

65.3

36.8

Major PPT

79.2

0.66

0.9

72.5

37.5

Minor 5ss

30.9

-2.2

3.2

46.4

Minor BPS

46.5

-0.4

1.8

49.52

44.1

Associated Gene:

Gene:

VSIR

Ensembl Gene ID:

ENSAPLG00000022193

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044542

17352750 - 17355222

2473

ENSAPLT00000020711

17352750 - 17356463

3714