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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17355062_17355735_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17355062 - 17355735

Intron Length:

674

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCGTG

5'SS Class:

strong_major

3'SS Sequence:

TCTCCTGCAGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAT

U12 Branch Point Sequence:

CATCCCTCATGC

Flanking Amino Acid:

RRAHELVRMESSAQGIENPV

Intron Amino Acid Position:

297

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

0.9

72.2

39.5

Major BPS

0.5

1.1

71.2

35.2

Major PPT

70.5

0.46

0.9

66.2

34.4

Minor 5ss

34.5

-1.8

3.4

45.9

49.3

Minor BPS

44.2

-0.4

53.29

Associated Gene:

Gene:

VSIR

Ensembl Gene ID:

ENSAPLG00000022193

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020711

17352750 - 17356463

3714