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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17362347_17362451_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17362347 - 17362451

Intron Length:

105

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGAGC

5'SS Class:

major

3'SS Sequence:

GCTCCTGCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCAAT

U12 Branch Point Sequence:

TCGGTCCCAATT

Flanking Amino Acid:

AVVRATDRDTGNGGLVSYKI

Intron Amino Acid Position:

1145

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

38.8

Major BPS

59.3

0.23

1.3

66.9

37.7

Major PPT

66.8

0.38

0.9

57.3

38.6

Minor 5ss

31.2

-2.1

3.4

42.5

44.6

Minor BPS

44.8

-0.3

1.9

59.79

44.4

Associated Gene:

Gene:

CDH23

Ensembl Gene ID:

ENSAPLG00000008813

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009324

17361709 - 17433984

72276