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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17362588_17363342_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17362588 - 17363342

Intron Length:

755

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTACGGGGC

5'SS Class:

major

3'SS Sequence:

GGGGGTTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCATCAC

U12 Branch Point Sequence:

TCTCCCCGCATT

Flanking Amino Acid:

EQGPMRSSVRVIVYVEDVND

Intron Amino Acid Position:

1100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.6

0.44

1.1

57.2

41.7

Major BPS

65.7

0.39

1.1

67.9

37.7

Major PPT

0.36

1.1

57.5

47.4

Minor 5ss

28.1

-2.5

3.6

32.1

42.7

Minor BPS

44.9

-0.3

2.1

67.02

43.7

Associated Gene:

Gene:

CDH23

Ensembl Gene ID:

ENSAPLG00000008813

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009324

17361709 - 17433984

72276