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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17365849_17365966_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

17365849 - 17365966

Intron Length:

118

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCCCGAAA

5'SS Class:

weak_major

3'SS Sequence:

CTCCCTCGTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTCAG

U12 Branch Point Sequence:

GGACGCTCAGCC

Flanking Amino Acid:

KSSTSTLTVKVLDVNDESPT

Intron Amino Acid Position:

891

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.4

0.08

1.5

56.9

43.8

Major BPS

47.4

-0.1

1.6

54.7

43.1

Major PPT

73.7

0.53

0.9

68.4

31.9

Minor 5ss

31.5

-2.1

3.2

40.1

45.6

Minor BPS

41.1

-0.7

47.26

41.1

Associated Gene:

Gene:

CDH23

Ensembl Gene ID:

ENSAPLG00000008813

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009324

17361709 - 17433984

72276