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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17371268_17372360_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17371268 - 17372360

Intron Length:

1093

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTACGTGCG

5'SS Class:

major

3'SS Sequence:

CCCCGTGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTGGTTTTAATT

Flanking Amino Acid:

MTPPNSDVTTVVAVDPDLGE

Intron Amino Acid Position:

799

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

1.1

61.2

43.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

70.6

0.46

0.9

63.5

36.9

Minor 5ss

32.4

-2

3.3

41.7

44.8

Minor BPS

67.5

0.63

1.3

78.42

39.1

Associated Gene:

Gene:

CDH23

Ensembl Gene ID:

ENSAPLG00000008813

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009324

17361709 - 17433984

72276