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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17372469_17373410_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17372469 - 17373410

Intron Length:

942

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

CTCTGCCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCAGAT

U12 Branch Point Sequence:

TGAGCCTGAGCT

Flanking Amino Acid:

GHHQKTGIAMVNITLLDIND

Intron Amino Acid Position:

763

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

67.6

37.6

Major BPS

48.6

-0

1.2

44.1

39.6

Major PPT

79.4

0.66

0.8

72.7

32.1

Minor 5ss

27.7

-2.6

29.4

36.9

Minor BPS

51.9

0.14

1.8

45.1

Associated Gene:

Gene:

CDH23

Ensembl Gene ID:

ENSAPLG00000008813

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009324

17361709 - 17433984

72276