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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17374599_17374775_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

17374599 - 17374775

Intron Length:

177

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGAGGC

5'SS Class:

strong_major

3'SS Sequence:

ACCCCACTACAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACCCCAC

U12 Branch Point Sequence:

TTTCCCCCCACC

Flanking Amino Acid:

VIAVVEDIMAGATVLFLNAT

Intron Amino Acid Position:

686

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

38.4

Major BPS

46.4

-0.2

1.2

52.1

34.1

Major PPT

49.8

-0

1.1

46.4

33.9

Minor 5ss

36.9

-1.5

3.3

50.4

46.2

Minor BPS

47.5

-0.2

2.3

69.49

41.6

Associated Gene:

Gene:

CDH23

Ensembl Gene ID:

ENSAPLG00000008813

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009324

17361709 - 17433984

72276