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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17374849_17376067_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17374849 - 17376067

Intron Length:

1219

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTAAGTACG

5'SS Class:

major

3'SS Sequence:

GTCTTTGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCAAAT

U12 Branch Point Sequence:

CCCAGCCAAATT

Flanking Amino Acid:

STVPVTIEVFDENDNPPTFS

Intron Amino Acid Position:

662

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.8

0.61

1.1

70.1

Major BPS

48.8

-0

1.2

55.2

38.9

Major PPT

78.6

0.64

0.9

72.9

37.4

Minor 5ss

38.6

-1.3

2.7

49.9

40.1

Minor BPS

37.7

-0.8

2.1

48.16

45.2

Associated Gene:

Gene:

CDH23

Ensembl Gene ID:

ENSAPLG00000008813

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009324

17361709 - 17433984

72276