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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17376717_17376927_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17376717 - 17376927

Intron Length:

211

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCCCCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTCAG

U12 Branch Point Sequence:

GTGTGGTCAGCA

Flanking Amino Acid:

VSYFFSDDPDRFSLDKDTGV

Intron Amino Acid Position:

504

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.83

70.9

39.9

Major BPS

48.3

-0.1

1.7

57.1

49.4

Major PPT

88.1

0.86

0.6

81.6

30.5

Minor 5ss

33.5

-1.9

3.2

44.4

43.5

Minor BPS

38.5

-0.8

2.5

52.13

45.6

Associated Gene:

Gene:

CDH23

Ensembl Gene ID:

ENSAPLG00000008813

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009324

17361709 - 17433984

72276