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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17376993_17385104_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17376993 - 17385104

Intron Length:

8112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTGAGTAGG

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

CATTTATTAACT

Flanking Amino Acid:

TVGTTVLQVHATDNDVGTYG

Intron Amino Acid Position:

483

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

1.3

68.8

43.8

Major BPS

81.9

0.79

0.8

81.9

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

31.1

-2.2

2.6

32.7

34.9

Minor BPS

68.9

0.67

1.6

82.01

39.1

Associated Gene:

Gene:

CDH23

Ensembl Gene ID:

ENSAPLG00000008813

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009324

17361709 - 17433984

72276