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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17385264_17385422_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17385264 - 17385422

Intron Length:

159

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTACGGCCA

5'SS Class:

major

3'SS Sequence:

CCTCCCCACCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCAAC

U12 Branch Point Sequence:

GAAGTTCCAACT

Flanking Amino Acid:

FETIPRYEFSLFANESIPDH

Intron Amino Acid Position:

430

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.1

0.45

1.1

54.7

44.1

Major BPS

61.9

0.3

1.2

70.7

33.5

Major PPT

66.8

0.38

0.9

57.9

32.1

Minor 5ss

30.4

-2.2

3.4

39.9

45.6

Minor BPS

42.7

-0.4

1.8

55.43

40.3

Associated Gene:

Gene:

CDH23

Ensembl Gene ID:

ENSAPLG00000008813

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025717

17382956 - 17430787

47832

ENSAPLT00000009324

17361709 - 17433984

72276