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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17403548_17406137_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17403548 - 17406137

Intron Length:

2590

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGTCGG

5'SS Class:

major

3'SS Sequence:

CTTGCTTTTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TTTTTCTGATAA

Flanking Amino Acid:

QAYQLQVNATDQDKNKPLST

Intron Amino Acid Position:

210

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

46.2

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

73.2

0.52

71.1

38.8

Minor 5ss

28.7

-2.4

2.8

33.1

41.8

Minor BPS

0.19

1.8

73.33

38.2

Associated Gene:

Gene:

CDH23

Ensembl Gene ID:

ENSAPLG00000008813

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032125

17386186 - 17433984

47799

ENSAPLT00000009324

17361709 - 17433984

72276