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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17429329_17430550_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17429329 - 17430550

Intron Length:

1222

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACAACA

5'SS Class:

major

3'SS Sequence:

CTTCCCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

CTTTAATTACAT

Flanking Amino Acid:

VWLRQPLDRETKSEFTVEFS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

1.1

74.4

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

86.7

0.83

0.7

84.2

23.6

Minor 5ss

39.3

-1.2

2.8

50.5

45.5

Minor BPS

47.4

-0.1

2.1

71.49

44.8

Associated Gene:

Gene:

CDH23

Ensembl Gene ID:

ENSAPLG00000008813

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009324

17361709 - 17433984

72276

ENSAPLT00000032125

17386186 - 17433984

47799

ENSAPLT00000025717

17382956 - 17430787

47832