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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17430881_17433963_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

17430881 - 17433963

Intron Length:

3083

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGGCTGTG

5'SS Class:

weak_major

3'SS Sequence:

AGGAGACCTTCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CATAAAA

U12 Branch Point Sequence:

CAGACCATAAAA

Flanking Amino Acid:

MCEQGREGHQVHPPSPT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.19

1.2

56.9

42.6

Major BPS

0.08

60.9

31.3

Major PPT

56.2

0.14

1.1

48.7

44.5

Minor 5ss

36.7

-1.5

3.6

47.8

42.9

Minor BPS

48.2

-0.1

1.8

55.9

42.4

Associated Gene:

Gene:

CDH23

Ensembl Gene ID:

ENSAPLG00000008813

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032125

17386186 - 17433984

47799

ENSAPLT00000009324

17361709 - 17433984

72276