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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17509986_17516093_R

Intron Information:

Intron Rank:

149804

Intron Class:

major

Intron Phase:

Intron Coordinates:

17509986 - 17516093

Intron Length:

6108

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TTTATAATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TTCTTTATAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

72.9

31.4

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

82.2

0.72

0.9

38.3

Minor 5ss

33.6

-1.9

41.1

45.4

Minor BPS

63.2

0.49

1.6

79.74

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032058

17509491 - 17516277

6787