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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17663843_17664197_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17663843 - 17664197

Intron Length:

355

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTACGAGCA

5'SS Class:

major

3'SS Sequence:

CTCCCCTGGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

TTCTTCTTACTC

Flanking Amino Acid:

KEFHFKDFNRAFGFMTRVAL

Intron Amino Acid Position:

124

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.3

0.5

1.1

59.8

39.5

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

63.7

0.31

60.5

35.2

Minor 5ss

29.2

-2.4

3.4

30.7

42.7

Minor BPS

65.4

0.46

1.6

73.1

38.8

Associated Gene:

Gene:

PCBD1

Ensembl Gene ID:

ENSAPLG00000021420

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033310

17663474 - 17665527

2054