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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17664279_17664765_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17664279 - 17664765

Intron Length:

487

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGAAC

5'SS Class:

strong_major

3'SS Sequence:

CTGTCTGCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTCAC

U12 Branch Point Sequence:

CTTTCTGCCACT

Flanking Amino Acid:

HPEWFNVYNKVHITLSTHEC

Intron Amino Acid Position:

151

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

82.1

Major BPS

54.8

0.12

1.2

58.7

38.1

Major PPT

72.1

0.5

0.9

69.8

36.7

Minor 5ss

32.6

-2

3.1

42.1

Minor BPS

44.9

-0.3

2.5

71.32

46.1

Associated Gene:

Gene:

PCBD1

Ensembl Gene ID:

ENSAPLG00000021420

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033310

17663474 - 17665527

2054