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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17670652_17671196_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17670652 - 17671196

Intron Length:

545

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTACGTGTG

5'SS Class:

major

3'SS Sequence:

ATGTTCCTTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTCTTTTTAATG

Flanking Amino Acid:

IIKTARFLESELRKIDSIFI

Intron Amino Acid Position:

444

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.4

0.39

1.1

44.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

68.2

0.41

1.1

65.2

40.9

Minor 5ss

36.5

-1.5

3.5

44.9

44.2

Minor BPS

71.1

0.52

1.3

69.97

38.4

Associated Gene:

Gene:

SGPL1

Ensembl Gene ID:

ENSAPLG00000003637

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021846

17669208 - 17688261

19054

ENSAPLT00000033957

17669208 - 17693835

24628

ENSAPLT00000003759

17668778 - 17692160

23383

ENSAPLT00000029822

17531077 - 17692286

161210

ENSAPLT00000023614

17669208 - 17691547

22340

ENSAPLT00000022349

17669208 - 17691254

22047