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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17671436_17671587_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17671436 - 17671587

Intron Length:

152

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGGG

5'SS Class:

strong_major

3'SS Sequence:

TTACCCCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

GCTTTGTTACCC

Flanking Amino Acid:

VTSISADTHKYGYAPKGSSV

Intron Amino Acid Position:

365

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

69.9

41.1

Major BPS

84.4

0.85

1.1

34.5

Major PPT

0.67

0.8

73.7

Minor 5ss

29.8

-2.3

3.3

38.5

46.6

Minor BPS

47.9

-0.1

2.3

61.92

43.9

Associated Gene:

Gene:

SGPL1

Ensembl Gene ID:

ENSAPLG00000003637

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023614

17669208 - 17691547

22340

ENSAPLT00000022349

17669208 - 17691254

22047

ENSAPLT00000021846

17669208 - 17688261

19054

ENSAPLT00000033957

17669208 - 17693835

24628

ENSAPLT00000003759

17668778 - 17692160

23383

ENSAPLT00000029822

17531077 - 17692286

161210