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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17673308_17674099_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17673308 - 17674099

Intron Length:

792

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGCAGC

5'SS Class:

major

3'SS Sequence:

GTTGCTTTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAA

U12 Branch Point Sequence:

CTGGGCTGAAGT

Flanking Amino Acid:

AYERGIKHPEMLVPVSAHAA

Intron Amino Acid Position:

246

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

1.1

69.1

41.9

Major BPS

49.7

-0

1.3

43.1

41.8

Major PPT

77.8

0.63

0.9

69.7

41.5

Minor 5ss

42.2

-0.9

2.9

56.7

Minor BPS

43.7

-0.4

2.2

59.86

49.3

Associated Gene:

Gene:

SGPL1

Ensembl Gene ID:

ENSAPLG00000003637

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022349

17669208 - 17691254

22047

ENSAPLT00000021846

17669208 - 17688261

19054

ENSAPLT00000033957

17669208 - 17693835

24628

ENSAPLT00000003759

17668778 - 17692160

23383

ENSAPLT00000029822

17531077 - 17692286

161210

ENSAPLT00000023614

17669208 - 17691547

22340