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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17680629_17682188_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17680629 - 17682188

Intron Length:

1560

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGTGC

5'SS Class:

strong_major

3'SS Sequence:

CTGTTTTCTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTCAC

U12 Branch Point Sequence:

TGTTTTCTGAAG

Flanking Amino Acid:

EEKLTRLLVQVYEEFAWSNP

Intron Amino Acid Position:

174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

37.3

Major BPS

59.7

0.24

1.3

65.3

41.6

Major PPT

73.8

0.53

75.3

33.5

Minor 5ss

31.6

-2.1

3.2

41.1

45.6

Minor BPS

47.1

-0.3

1.8

56.47

38.9

Associated Gene:

Gene:

SGPL1

Ensembl Gene ID:

ENSAPLG00000003637

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023614

17669208 - 17691547

22340

ENSAPLT00000022349

17669208 - 17691254

22047

ENSAPLT00000021846

17669208 - 17688261

19054

ENSAPLT00000033957

17669208 - 17693835

24628

ENSAPLT00000003759

17668778 - 17692160

23383

ENSAPLT00000029822

17531077 - 17692286

161210