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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17682269_17683808_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17682269 - 17683808

Intron Length:

1540

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGACTG

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTGCAA

U12 Branch Point Sequence:

GTGTCTGCAACC

Flanking Amino Acid:

LQKMKEYSSKGDVRWEDGKV

Intron Amino Acid Position:

147

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

68.1

42.8

Major BPS

53.2

0.08

1.4

65.6

41.4

Major PPT

93.5

0.98

0.6

92.3

18.1

Minor 5ss

41.7

-0.9

3.1

48.1

Minor BPS

48.2

-0.1

2.2

63.03

42.7

Associated Gene:

Gene:

SGPL1

Ensembl Gene ID:

ENSAPLG00000003637

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022349

17669208 - 17691254

22047

ENSAPLT00000021846

17669208 - 17688261

19054

ENSAPLT00000033957

17669208 - 17693835

24628

ENSAPLT00000003759

17668778 - 17692160

23383

ENSAPLT00000029822

17531077 - 17692286

161210

ENSAPLT00000023614

17669208 - 17691547

22340