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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17683957_17685894_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17683957 - 17685894

Intron Length:

1938

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

CCTTTCTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

CTTTTGTTGATA

Flanking Amino Acid:

LRRMPFVGAIIQKKIDEALN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

86.4

28.9

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

85.5

0.8

0.6

84.4

23.5

Minor 5ss

43.5

-0.7

2.9

62.1

37.1

Minor BPS

53.7

0.11

2.1

68.91

38.3

Associated Gene:

Gene:

SGPL1

Ensembl Gene ID:

ENSAPLG00000003637

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023614

17669208 - 17691547

22340

ENSAPLT00000022349

17669208 - 17691254

22047

ENSAPLT00000021846

17669208 - 17688261

19054

ENSAPLT00000033957

17669208 - 17693835

24628

ENSAPLT00000003759

17668778 - 17692160

23383

ENSAPLT00000029822

17531077 - 17692286

161210