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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17685963_17687789_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17685963 - 17687789

Intron Length:

1827

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

TTTTCTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTGAG

U12 Branch Point Sequence:

ATTAGGTTAACT

Flanking Amino Acid:

WLHSFLFQPESLTSRIKKQF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.67

78.2

36.3

Major BPS

59.9

0.25

1.6

59.3

47.1

Major PPT

92.3

0.95

0.6

85.1

29.7

Minor 5ss

39.6

-1.2

2.8

49.5

40.3

Minor BPS

51.8

0.13

2.4

79.06

42.9

Associated Gene:

Gene:

SGPL1

Ensembl Gene ID:

ENSAPLG00000003637

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023614

17669208 - 17691547

22340

ENSAPLT00000022349

17669208 - 17691254

22047

ENSAPLT00000021846

17669208 - 17688261

19054

ENSAPLT00000033957

17669208 - 17693835

24628

ENSAPLT00000003759

17668778 - 17692160

23383

ENSAPLT00000029822

17531077 - 17692286

161210