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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17687956_17693817_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17687956 - 17693817

Intron Length:

5862

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

TCCCTTGGTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

CTTGTCTTAATG

Flanking Amino Acid:

MNQEGQDAISSYKEIL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

38.2

Major BPS

0.92

0.9

86.2

29.1

Major PPT

68.4

0.41

64.4

36.6

Minor 5ss

27.2

-2.6

33.9

41.8

Minor BPS

65.7

0.36

1.5

66.07

42.7

Associated Gene:

Gene:

SGPL1

Ensembl Gene ID:

ENSAPLG00000003637

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033957

17669208 - 17693835

24628