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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17690499_17692053_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

17690499 - 17692053

Intron Length:

1555

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTGAGTGGT

5'SS Class:

major

3'SS Sequence:

TGGTCTTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTGAT

U12 Branch Point Sequence:

GCTGACTTGATG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.1

65.6

40.2

Major BPS

0.62

65.3

41.5

Major PPT

81.4

0.71

0.9

73.1

42.1

Minor 5ss

31.9

-2.1

3.4

46.3

Minor BPS

48.7

-0.2

1.7

51.75

43.2

Associated Gene:

Gene:

SGPL1

Ensembl Gene ID:

ENSAPLG00000003637

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029822

17531077 - 17692286

161210

ENSAPLT00000003759

17668778 - 17692160

23383