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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17706052_17707348_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17706052 - 17707348

Intron Length:

1297

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGGC

5'SS Class:

strong_major

3'SS Sequence:

TGCCTGTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAA

U12 Branch Point Sequence:

GGCCCCTCAACG

Flanking Amino Acid:

LCCSFLSTAKGDPQALSFPA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.8

73.3

36.4

Major BPS

60.8

0.27

1.1

63.2

34.1

Major PPT

70.1

0.45

0.9

40.2

Minor 5ss

30.8

-2.2

3.3

41.8

Minor BPS

53.4

-0

1.7

55.22

45.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004184

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004321

17705985 - 17714176

8192