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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17709179_17709649_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

17709179 - 17709649

Intron Length:

471

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTCGGTGAC

5'SS Class:

weak_major

3'SS Sequence:

AATGTCCTTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCAAAT

U12 Branch Point Sequence:

ATTCCTCCAAAT

Flanking Amino Acid:

FRRGCTHCPSLVAYLKTFDG

Intron Amino Acid Position:

304

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.5

0.04

1.4

51.7

40.1

Major BPS

64.7

0.37

1.1

69.5

34.1

Major PPT

75.6

0.58

0.9

70.8

40.1

Minor 5ss

29.2

-2.4

3.3

39.9

40.2

Minor BPS

47.6

-0.1

1.9

70.73

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004184

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004321

17705985 - 17714176

8192