Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_17710488_17722573_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

17710488 - 17722573

Intron Length:

12086

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACCCCT

5'SS Class:

major

3'SS Sequence:

TGGCTGAAAGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TAAATAT

U12 Branch Point Sequence:

CCTGGCTGAAAG

Flanking Amino Acid:

TQGEGRGHAAR*

Intron Amino Acid Position:

1151

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.59

1.2

66.3

45.2

Major BPS

59.7

0.24

1.1

55.7

39.9

Major PPT

54.5

0.1

1.1

48.8

42.9

Minor 5ss

46.1

-0.4

2.9

66.6

44.3

Minor BPS

42.7

-0.6

2.1

44.82

47.1

Associated Gene:

Gene:

ADAMTS14

Ensembl Gene ID:

ENSAPLG00000005322

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005517

17709662 - 17743573

33912