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Intron Name: Anas_platyrhynchos_platyrhynchos_6_17711929_17712613_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17711929 - 17712613

Intron Length:

685

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGACACCA

5'SS Class:

major

3'SS Sequence:

CTCTGTCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTCAT

U12 Branch Point Sequence:

TTAGCTTCACCA

Flanking Amino Acid:

VSSSFLGPLTATQDLLSTFG

Intron Amino Acid Position:

622

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.5

0.51

1.1

61.3

39.3

Major BPS

79.8

0.74

0.9

81.3

29.9

Major PPT

83.2

0.75

0.8

80.3

31.8

Minor 5ss

32.3

-2

40.3

45.3

Minor BPS

48.9

-0

1.9

64.02

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004184

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004321

17705985 - 17714176

8192